Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG87083.1 | aat | SAMN04488135_101476 | SAMN04488135_106117 | Chorismate mutase. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.449 |
| SHH94248.1 | SHH94263.1 | SAMN04488135_106118 | SAMN04488135_106119 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Protein of unknown function. | 0.701 |
| SHH94248.1 | aat | SAMN04488135_106118 | SAMN04488135_106117 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.780 |
| SHH94248.1 | bpt | SAMN04488135_106118 | SAMN04488135_106116 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.792 |
| SHH94248.1 | pyrD | SAMN04488135_106118 | SAMN04488135_106115 | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.751 |
| SHH94263.1 | SHH94248.1 | SAMN04488135_106119 | SAMN04488135_106118 | Protein of unknown function. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.701 |
| SHH94263.1 | aat | SAMN04488135_106119 | SAMN04488135_106117 | Protein of unknown function. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.577 |
| SHH94263.1 | bpt | SAMN04488135_106119 | SAMN04488135_106116 | Protein of unknown function. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.491 |
| SHH94263.1 | pyrD | SAMN04488135_106119 | SAMN04488135_106115 | Protein of unknown function. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.491 |
| SHI03704.1 | aat | SAMN04488135_107163 | SAMN04488135_106117 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.503 |
| SHI03704.1 | clpS | SAMN04488135_107163 | SAMN04488135_107162 | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.995 |
| aat | SHG87083.1 | SAMN04488135_106117 | SAMN04488135_101476 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Chorismate mutase. | 0.449 |
| aat | SHH94248.1 | SAMN04488135_106117 | SAMN04488135_106118 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.780 |
| aat | SHH94263.1 | SAMN04488135_106117 | SAMN04488135_106119 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Protein of unknown function. | 0.577 |
| aat | SHI03704.1 | SAMN04488135_106117 | SAMN04488135_107163 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease ATP-binding subunit ClpA; Belongs to the ClpA/ClpB family. | 0.503 |
| aat | bpt | SAMN04488135_106117 | SAMN04488135_106116 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | 0.829 |
| aat | clpS | SAMN04488135_106117 | SAMN04488135_107162 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.804 |
| aat | pyrD | SAMN04488135_106117 | SAMN04488135_106115 | leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.743 |
| bpt | SHH94248.1 | SAMN04488135_106116 | SAMN04488135_106118 | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | ADP-ribose pyrophosphatase YjhB, NUDIX family; Belongs to the Nudix hydrolase family. | 0.792 |
| bpt | SHH94263.1 | SAMN04488135_106116 | SAMN04488135_106119 | arginine-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily. | Protein of unknown function. | 0.491 |
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