STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH93532.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (84 aa)    
Predicted Functional Partners:
SHH93557.1
Hypothetical protein.
   
 0.984
SHG83603.1
RelE toxin of RelE / RelB toxin-antitoxin system.
 
 
 
 0.767
SHH74144.1
Hypothetical protein.
 
   
 0.735
SHH10772.1
ParE toxin of type II toxin-antitoxin system, parDE.
   
 
 0.725
vapC-4
Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.
 
   
 0.717
SHH16686.1
Hypothetical protein; Belongs to the pirin family.
 
      0.708
SHH93508.1
Threonine dehydratase.
       0.504
SHI24186.1
Putative cyclase.
  
     0.489
SHH63772.1
Hypothetical protein.
  
   
 0.477
SHH70018.1
Kynurenine formamidase.
  
     0.469
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.