STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH91736.1Rubrerythrin. (193 aa)    
Predicted Functional Partners:
SHH91761.1
Cytochrome c.
 
    0.871
SHH91710.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
    0.766
SHG84334.1
CDP-4-dehydro-6-deoxyglucose reductase.
   
 
 0.671
SHI19553.1
NAD(P)H-flavin reductase.
   
 
 0.671
SHI19574.1
Cytochrome b subunit of the bc complex.
   
   0.623
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.471
SHI40738.1
Molybdopterin synthase subunit MoaD.
   
 
  0.466
SHH97304.1
Protein of unknown function.
  
     0.450
SHH91687.1
alpha-D-xyloside xylohydrolase; Belongs to the glycosyl hydrolase 31 family.
       0.433
SHI23283.1
Hypothetical protein.
   
    0.426
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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