Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHH96644.1 | SHI12247.1 | SAMN04488135_106253 | SAMN04488135_109163 | IS66 C-terminal element. | IS66 Orf2 like protein. | 0.782 |
SHH96644.1 | SHI12262.1 | SAMN04488135_106253 | SAMN04488135_109164 | IS66 C-terminal element. | Transposase. | 0.720 |
SHH96644.1 | SHI12343.1 | SAMN04488135_106253 | SAMN04488135_109170 | IS66 C-terminal element. | Zinc-finger binding domain of transposase IS66. | 0.974 |
SHI10523.1 | SHI12262.1 | SAMN04488135_10930 | SAMN04488135_109164 | Competence protein ComEC. | Transposase. | 0.449 |
SHI12234.1 | SHI12247.1 | SAMN04488135_109162 | SAMN04488135_109163 | Transposase. | IS66 Orf2 like protein. | 0.899 |
SHI12234.1 | SHI12262.1 | SAMN04488135_109162 | SAMN04488135_109164 | Transposase. | Transposase. | 0.878 |
SHI12247.1 | SHH96644.1 | SAMN04488135_109163 | SAMN04488135_106253 | IS66 Orf2 like protein. | IS66 C-terminal element. | 0.782 |
SHI12247.1 | SHI12234.1 | SAMN04488135_109163 | SAMN04488135_109162 | IS66 Orf2 like protein. | Transposase. | 0.899 |
SHI12247.1 | SHI12262.1 | SAMN04488135_109163 | SAMN04488135_109164 | IS66 Orf2 like protein. | Transposase. | 0.949 |
SHI12247.1 | SHI12274.1 | SAMN04488135_109163 | SAMN04488135_109165 | IS66 Orf2 like protein. | Integrase core domain-containing protein. | 0.480 |
SHI12247.1 | SHI12343.1 | SAMN04488135_109163 | SAMN04488135_109170 | IS66 Orf2 like protein. | Zinc-finger binding domain of transposase IS66. | 0.782 |
SHI12262.1 | SHH96644.1 | SAMN04488135_109164 | SAMN04488135_106253 | Transposase. | IS66 C-terminal element. | 0.720 |
SHI12262.1 | SHI10523.1 | SAMN04488135_109164 | SAMN04488135_10930 | Transposase. | Competence protein ComEC. | 0.449 |
SHI12262.1 | SHI12234.1 | SAMN04488135_109164 | SAMN04488135_109162 | Transposase. | Transposase. | 0.878 |
SHI12262.1 | SHI12247.1 | SAMN04488135_109164 | SAMN04488135_109163 | Transposase. | IS66 Orf2 like protein. | 0.949 |
SHI12262.1 | SHI12274.1 | SAMN04488135_109164 | SAMN04488135_109165 | Transposase. | Integrase core domain-containing protein. | 0.574 |
SHI12262.1 | SHI12343.1 | SAMN04488135_109164 | SAMN04488135_109170 | Transposase. | Zinc-finger binding domain of transposase IS66. | 0.763 |
SHI12262.1 | SHI18853.1 | SAMN04488135_109164 | SAMN04488135_11246 | Transposase. | Peptidase inhibitor I78 family protein. | 0.466 |
SHI12262.1 | SHI24239.1 | SAMN04488135_109164 | SAMN04488135_11559 | Transposase. | ABC-type nitrate/sulfonate/bicarbonate transport system, substrate-binding protein. | 0.485 |
SHI12274.1 | SHI12247.1 | SAMN04488135_109165 | SAMN04488135_109163 | Integrase core domain-containing protein. | IS66 Orf2 like protein. | 0.480 |
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