STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI10523.1Competence protein ComEC. (831 aa)    
Predicted Functional Partners:
SHH43528.1
DNA protecting protein DprA.
 
  
 0.941
SHI27164.1
comF family protein.
 
  
 0.928
SHG92523.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Belongs to the peptidase A24 family.
 
  
 0.802
SHH21890.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Belongs to the peptidase A24 family.
 
  
 0.795
SHI12421.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Belongs to the peptidase A24 family.
 
  
 0.783
SHH39391.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
  
  
 0.778
SHI29634.1
Leader peptidase (prepilin peptidase) / N-methyltransferase; Belongs to the peptidase A24 family.
 
  
 0.774
SHG86815.1
Competence protein ComEA.
  
  
 0.759
SHI10509.1
2-oxoisovalerate dehydrogenase E1 component alpha subunit.
   
   0.753
SHG83978.1
Hypothetical protein.
   
  
 0.743
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.