Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG84891.1 | SHI01345.1 | SAMN04488135_101417 | SAMN04488135_10735 | mRNA interferase MazF. | mRNA interferase ChpB. | 0.749 |
SHG84891.1 | SHI10652.1 | SAMN04488135_101417 | SAMN04488135_10938 | mRNA interferase MazF. | Transcriptional regulator, HxlR family. | 0.507 |
SHG84891.1 | SHI13860.1 | SAMN04488135_101417 | SAMN04488135_11030 | mRNA interferase MazF. | Transcriptional regulator, HxlR family. | 0.507 |
SHG84891.1 | SHI27319.1 | SAMN04488135_101417 | SAMN04488135_11839 | mRNA interferase MazF. | Transcriptional regulator, HxlR family. | 0.507 |
SHI01345.1 | SHG84891.1 | SAMN04488135_10735 | SAMN04488135_101417 | mRNA interferase ChpB. | mRNA interferase MazF. | 0.749 |
SHI01345.1 | SHI10652.1 | SAMN04488135_10735 | SAMN04488135_10938 | mRNA interferase ChpB. | Transcriptional regulator, HxlR family. | 0.507 |
SHI01345.1 | SHI13860.1 | SAMN04488135_10735 | SAMN04488135_11030 | mRNA interferase ChpB. | Transcriptional regulator, HxlR family. | 0.507 |
SHI01345.1 | SHI27319.1 | SAMN04488135_10735 | SAMN04488135_11839 | mRNA interferase ChpB. | Transcriptional regulator, HxlR family. | 0.507 |
SHI10652.1 | SHG84891.1 | SAMN04488135_10938 | SAMN04488135_101417 | Transcriptional regulator, HxlR family. | mRNA interferase MazF. | 0.507 |
SHI10652.1 | SHI01345.1 | SAMN04488135_10938 | SAMN04488135_10735 | Transcriptional regulator, HxlR family. | mRNA interferase ChpB. | 0.507 |
SHI10652.1 | SHI13860.1 | SAMN04488135_10938 | SAMN04488135_11030 | Transcriptional regulator, HxlR family. | Transcriptional regulator, HxlR family. | 0.763 |
SHI10652.1 | SHI22313.1 | SAMN04488135_10938 | SAMN04488135_1142 | Transcriptional regulator, HxlR family. | mRNA interferase MazF. | 0.507 |
SHI13860.1 | SHG84891.1 | SAMN04488135_11030 | SAMN04488135_101417 | Transcriptional regulator, HxlR family. | mRNA interferase MazF. | 0.507 |
SHI13860.1 | SHI01345.1 | SAMN04488135_11030 | SAMN04488135_10735 | Transcriptional regulator, HxlR family. | mRNA interferase ChpB. | 0.507 |
SHI13860.1 | SHI10652.1 | SAMN04488135_11030 | SAMN04488135_10938 | Transcriptional regulator, HxlR family. | Transcriptional regulator, HxlR family. | 0.763 |
SHI13860.1 | SHI13869.1 | SAMN04488135_11030 | SAMN04488135_11031 | Transcriptional regulator, HxlR family. | Hypothetical protein. | 0.620 |
SHI13860.1 | SHI22313.1 | SAMN04488135_11030 | SAMN04488135_1142 | Transcriptional regulator, HxlR family. | mRNA interferase MazF. | 0.507 |
SHI13860.1 | SHI27319.1 | SAMN04488135_11030 | SAMN04488135_11839 | Transcriptional regulator, HxlR family. | Transcriptional regulator, HxlR family. | 0.466 |
SHI13869.1 | SHI13860.1 | SAMN04488135_11031 | SAMN04488135_11030 | Hypothetical protein. | Transcriptional regulator, HxlR family. | 0.620 |
SHI22313.1 | SHI10652.1 | SAMN04488135_1142 | SAMN04488135_10938 | mRNA interferase MazF. | Transcriptional regulator, HxlR family. | 0.507 |
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