STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI14535.1iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (361 aa)    
Predicted Functional Partners:
SHI14523.1
iron(III) transport system permease protein.
 
 
 0.989
SHH75272.1
ABC-type spermidine/putrescine transport system, permease component I.
 
 0.967
SHH82376.1
iron(III) transport system permease protein.
 
 
 0.891
SHH82404.1
iron(III) transport system substrate-binding protein.
  
 
 0.880
SHI03129.1
Putative spermidine/putrescine transport system permease protein.
 
 0.865
SHI28915.1
Putative spermidine/putrescine transport system permease protein.
 
 0.865
SHH82345.1
iron(III) transport system ATP-binding protein.
  
  
 
0.855
SHG69021.1
Putative spermidine/putrescine transport system permease protein.
 
 0.848
SHI28902.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.844
SHI35982.1
Putative spermidine/putrescine transport system permease protein.
 0.839
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.