STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI17630.1Catecholate siderophore receptor. (748 aa)    
Predicted Functional Partners:
SHH81414.1
Amino acid adenylation domain-containing protein.
  
  
 0.959
SHI02410.1
PKHD-type hydroxylase.
 
  
 0.910
SHH81386.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
  
  
 0.741
SHG68368.1
Hemoglobin/transferrin/lactoferrin receptor protein.
  
  
 0.686
SHI16865.1
Hemoglobin/transferrin/lactoferrin receptor protein.
  
  
 0.600
SHG93686.1
Iron complex outermembrane recepter protein.
  
  
 0.592
SHH86059.1
Outer membrane protein (porin).
   
    0.580
SHH80389.1
High-affinity iron transporter.
   
    0.551
SHI26261.1
High-affinity iron transporter.
   
    0.551
SHG70837.1
Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
   
    0.485
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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