STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI16686.1dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family. (396 aa)    
Predicted Functional Partners:
SHH94540.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
 
 0.926
SHH94521.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
 
 0.925
SHI49479.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
 
 
 0.920
SHH94485.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.872
SHI16586.1
NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.
 
 
 0.871
SHI16677.1
Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.861
SHI16696.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
  
 0.851
SHH66606.1
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.838
SHI19553.1
NAD(P)H-flavin reductase.
  
 
 0.822
SHI16604.1
Predicted dehydrogenase.
 
 
 0.793
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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