STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI19837.1Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. (775 aa)    
Predicted Functional Partners:
SHH81414.1
Amino acid adenylation domain-containing protein.
  
  
 0.927
SHI19842.1
FecR family protein.
 
 
 0.896
SHI19862.1
FecR family protein.
 
 
 0.863
SHH81569.1
FecR family protein.
 
 
 0.858
SHH49114.1
FecR family protein.
 
 
 0.854
SHI32119.1
FecR family protein.
 
 
 0.848
SHH12162.1
FecR family protein.
 
 
 0.844
SHI08292.1
FecR family protein.
 
 
 0.844
SHI46651.1
FecR family protein.
 
 
 0.840
SHG79368.1
FecR family protein.
 
 
 0.836
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.