Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHI18646.1 | SHI18651.1 | SAMN04488135_11220 | SAMN04488135_11221 | Beta-hydroxylase. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.523 |
SHI18646.1 | SHI18655.1 | SAMN04488135_11220 | SAMN04488135_11222 | Beta-hydroxylase. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.513 |
SHI18646.1 | SHI18659.1 | SAMN04488135_11220 | SAMN04488135_11223 | Beta-hydroxylase. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.468 |
SHI18651.1 | SHI18646.1 | SAMN04488135_11221 | SAMN04488135_11220 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | Beta-hydroxylase. | 0.523 |
SHI18651.1 | SHI18655.1 | SAMN04488135_11221 | SAMN04488135_11222 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.757 |
SHI18651.1 | SHI18659.1 | SAMN04488135_11221 | SAMN04488135_11223 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.683 |
SHI18651.1 | SHI18666.1 | SAMN04488135_11221 | SAMN04488135_11224 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | DNA-binding transcriptional regulator, GntR family. | 0.491 |
SHI18651.1 | SHI18674.1 | SAMN04488135_11221 | SAMN04488135_11225 | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | Hypothetical protein. | 0.442 |
SHI18655.1 | SHI18646.1 | SAMN04488135_11222 | SAMN04488135_11220 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Beta-hydroxylase. | 0.513 |
SHI18655.1 | SHI18651.1 | SAMN04488135_11222 | SAMN04488135_11221 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.757 |
SHI18655.1 | SHI18659.1 | SAMN04488135_11222 | SAMN04488135_11223 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Tripartite-type tricarboxylate transporter, receptor component TctC. | 0.697 |
SHI18655.1 | SHI18666.1 | SAMN04488135_11222 | SAMN04488135_11224 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | DNA-binding transcriptional regulator, GntR family. | 0.501 |
SHI18655.1 | SHI18674.1 | SAMN04488135_11222 | SAMN04488135_11225 | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | Hypothetical protein. | 0.450 |
SHI18659.1 | SHI18646.1 | SAMN04488135_11223 | SAMN04488135_11220 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Beta-hydroxylase. | 0.468 |
SHI18659.1 | SHI18651.1 | SAMN04488135_11223 | SAMN04488135_11221 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.683 |
SHI18659.1 | SHI18655.1 | SAMN04488135_11223 | SAMN04488135_11222 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.697 |
SHI18659.1 | SHI18666.1 | SAMN04488135_11223 | SAMN04488135_11224 | Tripartite-type tricarboxylate transporter, receptor component TctC. | DNA-binding transcriptional regulator, GntR family. | 0.550 |
SHI18659.1 | SHI18674.1 | SAMN04488135_11223 | SAMN04488135_11225 | Tripartite-type tricarboxylate transporter, receptor component TctC. | Hypothetical protein. | 0.493 |
SHI18666.1 | SHI18651.1 | SAMN04488135_11224 | SAMN04488135_11221 | DNA-binding transcriptional regulator, GntR family. | Crotonobetainyl-CoA:carnitine CoA-transferase CaiB; Belongs to the CoA-transferase III family. | 0.491 |
SHI18666.1 | SHI18655.1 | SAMN04488135_11224 | SAMN04488135_11222 | DNA-binding transcriptional regulator, GntR family. | Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.501 |
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