Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG84334.1 | SHH81414.1 | SAMN04488135_101404 | SAMN04488135_10548 | CDP-4-dehydro-6-deoxyglucose reductase. | Amino acid adenylation domain-containing protein. | 0.907 |
| SHG84334.1 | SHI19553.1 | SAMN04488135_101404 | SAMN04488135_112128 | CDP-4-dehydro-6-deoxyglucose reductase. | NAD(P)H-flavin reductase. | 0.983 |
| SHG84334.1 | SHI23185.1 | SAMN04488135_101404 | SAMN04488135_114127 | CDP-4-dehydro-6-deoxyglucose reductase. | Hypothetical protein. | 0.562 |
| SHG84334.1 | nuoD | SAMN04488135_101404 | SAMN04488135_111125 | CDP-4-dehydro-6-deoxyglucose reductase. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.940 |
| SHH81414.1 | SHG84334.1 | SAMN04488135_10548 | SAMN04488135_101404 | Amino acid adenylation domain-containing protein. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.907 |
| SHH81414.1 | SHI19553.1 | SAMN04488135_10548 | SAMN04488135_112128 | Amino acid adenylation domain-containing protein. | NAD(P)H-flavin reductase. | 0.997 |
| SHH81414.1 | SHI23180.1 | SAMN04488135_10548 | SAMN04488135_114126 | Amino acid adenylation domain-containing protein. | Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.664 |
| SHH81414.1 | SHI23185.1 | SAMN04488135_10548 | SAMN04488135_114127 | Amino acid adenylation domain-containing protein. | Hypothetical protein. | 0.574 |
| SHH81414.1 | SHI26093.1 | SAMN04488135_10548 | SAMN04488135_1174 | Amino acid adenylation domain-containing protein. | Succinate dehydrogenase subunit C. | 0.755 |
| SHH81414.1 | nuoD | SAMN04488135_10548 | SAMN04488135_111125 | Amino acid adenylation domain-containing protein. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.993 |
| SHH97641.1 | SHI23185.1 | SAMN04488135_106310 | SAMN04488135_114127 | Transcriptional regulator, ArsR family. | Hypothetical protein. | 0.545 |
| SHI19553.1 | SHG84334.1 | SAMN04488135_112128 | SAMN04488135_101404 | NAD(P)H-flavin reductase. | CDP-4-dehydro-6-deoxyglucose reductase. | 0.983 |
| SHI19553.1 | SHH81414.1 | SAMN04488135_112128 | SAMN04488135_10548 | NAD(P)H-flavin reductase. | Amino acid adenylation domain-containing protein. | 0.997 |
| SHI19553.1 | SHI23185.1 | SAMN04488135_112128 | SAMN04488135_114127 | NAD(P)H-flavin reductase. | Hypothetical protein. | 0.599 |
| SHI19553.1 | SHI26093.1 | SAMN04488135_112128 | SAMN04488135_1174 | NAD(P)H-flavin reductase. | Succinate dehydrogenase subunit C. | 0.560 |
| SHI19553.1 | nuoD | SAMN04488135_112128 | SAMN04488135_111125 | NAD(P)H-flavin reductase. | NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family. | 0.998 |
| SHI23159.1 | SHI23165.1 | SAMN04488135_114123 | SAMN04488135_114124 | Arsenical resistance protein ArsH. | Arsenate reductase. | 0.819 |
| SHI23159.1 | SHI23172.1 | SAMN04488135_114123 | SAMN04488135_114125 | Arsenical resistance protein ArsH. | Arsenite transporter, ACR3 family. | 0.793 |
| SHI23159.1 | SHI23180.1 | SAMN04488135_114123 | SAMN04488135_114126 | Arsenical resistance protein ArsH. | Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.796 |
| SHI23159.1 | SHI23185.1 | SAMN04488135_114123 | SAMN04488135_114127 | Arsenical resistance protein ArsH. | Hypothetical protein. | 0.532 |
page 1 of 3