STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI22454.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
SHI22437.1
Pimeloyl-ACP methyl ester carboxylesterase.
     
 0.776
SHI22446.1
Hypothetical protein.
       0.773
SHI22420.1
Hypothetical protein.
       0.722
SHI22428.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
       0.722
SHI19553.1
NAD(P)H-flavin reductase.
  
 
  0.646
SHG84334.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 
  0.638
SHG85899.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
    
  0.582
SHI29247.1
Catechol 2,3-dioxygenase.
 
  
 0.578
SHI23350.1
Hypothetical protein.
    
 0.564
SHH92128.1
Spore maturation protein SpmA.
   
    0.563
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.