Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHG74181.1 | SHH81414.1 | SAMN04488135_101171 | SAMN04488135_10548 | Ornithine cyclodeaminase. | Amino acid adenylation domain-containing protein. | 0.624 |
| SHG74181.1 | SHI03772.1 | SAMN04488135_101171 | SAMN04488135_107167 | Ornithine cyclodeaminase. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.786 |
| SHG74181.1 | SHI24777.1 | SAMN04488135_101171 | SAMN04488135_115123 | Ornithine cyclodeaminase. | Ornithine cyclodeaminase. | 0.676 |
| SHG74181.1 | SHI26558.1 | SAMN04488135_101171 | SAMN04488135_11771 | Ornithine cyclodeaminase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.535 |
| SHG74181.1 | SHI28890.1 | SAMN04488135_101171 | SAMN04488135_12032 | Ornithine cyclodeaminase. | Proline racemase; Belongs to the proline racemase family. | 0.673 |
| SHG74181.1 | argD | SAMN04488135_101171 | SAMN04488135_104319 | Ornithine cyclodeaminase. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.521 |
| SHG74181.1 | hutG | SAMN04488135_101171 | SAMN04488135_11053 | Ornithine cyclodeaminase. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.538 |
| SHG74181.1 | proC | SAMN04488135_101171 | SAMN04488135_105101 | Ornithine cyclodeaminase. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.571 |
| SHH81414.1 | SHG74181.1 | SAMN04488135_10548 | SAMN04488135_101171 | Amino acid adenylation domain-containing protein. | Ornithine cyclodeaminase. | 0.624 |
| SHH81414.1 | SHI03772.1 | SAMN04488135_10548 | SAMN04488135_107167 | Amino acid adenylation domain-containing protein. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.886 |
| SHH81414.1 | SHI24772.1 | SAMN04488135_10548 | SAMN04488135_115122 | Amino acid adenylation domain-containing protein. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.887 |
| SHH81414.1 | SHI24777.1 | SAMN04488135_10548 | SAMN04488135_115123 | Amino acid adenylation domain-containing protein. | Ornithine cyclodeaminase. | 0.534 |
| SHH81414.1 | SHI26558.1 | SAMN04488135_10548 | SAMN04488135_11771 | Amino acid adenylation domain-containing protein. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.970 |
| SHH81414.1 | argD | SAMN04488135_10548 | SAMN04488135_104319 | Amino acid adenylation domain-containing protein. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.579 |
| SHH81414.1 | hutG | SAMN04488135_10548 | SAMN04488135_11053 | Amino acid adenylation domain-containing protein. | Formiminoglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family. | 0.433 |
| SHH81414.1 | proC | SAMN04488135_10548 | SAMN04488135_105101 | Amino acid adenylation domain-containing protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.497 |
| SHH81414.1 | ycgR | SAMN04488135_10548 | SAMN04488135_115124 | Amino acid adenylation domain-containing protein. | c-di-GMP-binding flagellar brake protein YcgR, contains PilZNR and PilZ domains; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. | 0.985 |
| SHI03772.1 | SHG74181.1 | SAMN04488135_107167 | SAMN04488135_101171 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Ornithine cyclodeaminase. | 0.786 |
| SHI03772.1 | SHH81414.1 | SAMN04488135_107167 | SAMN04488135_10548 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Amino acid adenylation domain-containing protein. | 0.886 |
| SHI03772.1 | SHI24772.1 | SAMN04488135_107167 | SAMN04488135_115122 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.891 |
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