Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG66580.1 | SHH81414.1 | SAMN04488135_1011 | SAMN04488135_10548 | Citrate synthase. | Amino acid adenylation domain-containing protein. | 0.789 |
SHG66580.1 | SHI15065.1 | SAMN04488135_1011 | SAMN04488135_110134 | Citrate synthase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.933 |
SHG66580.1 | SHI16491.1 | SAMN04488135_1011 | SAMN04488135_11121 | Citrate synthase. | Isocitrate dehydrogenase (NADP). | 0.829 |
SHG66580.1 | SHI26116.1 | SAMN04488135_1011 | SAMN04488135_1177 | Citrate synthase. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.906 |
SHG66580.1 | fumC | SAMN04488135_1011 | SAMN04488135_105112 | Citrate synthase. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.751 |
SHG66580.1 | glcB | SAMN04488135_1011 | SAMN04488135_104314 | Citrate synthase. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.878 |
SHG66580.1 | mdh | SAMN04488135_1011 | SAMN04488135_1172 | Citrate synthase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.960 |
SHG75554.1 | SHH81414.1 | SAMN04488135_101201 | SAMN04488135_10548 | Citrate synthase. | Amino acid adenylation domain-containing protein. | 0.789 |
SHG75554.1 | SHI15065.1 | SAMN04488135_101201 | SAMN04488135_110134 | Citrate synthase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.975 |
SHG75554.1 | SHI16491.1 | SAMN04488135_101201 | SAMN04488135_11121 | Citrate synthase. | Isocitrate dehydrogenase (NADP). | 0.829 |
SHG75554.1 | SHI26116.1 | SAMN04488135_101201 | SAMN04488135_1177 | Citrate synthase. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.905 |
SHG75554.1 | SHI26130.1 | SAMN04488135_101201 | SAMN04488135_1179 | Citrate synthase. | Citrate synthase; Belongs to the citrate synthase family. | 0.870 |
SHG75554.1 | fumC | SAMN04488135_101201 | SAMN04488135_105112 | Citrate synthase. | Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily. | 0.933 |
SHG75554.1 | glcB | SAMN04488135_101201 | SAMN04488135_104314 | Citrate synthase. | Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.974 |
SHG75554.1 | mdh | SAMN04488135_101201 | SAMN04488135_1172 | Citrate synthase. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.990 |
SHH81414.1 | SHG66580.1 | SAMN04488135_10548 | SAMN04488135_1011 | Amino acid adenylation domain-containing protein. | Citrate synthase. | 0.789 |
SHH81414.1 | SHG75554.1 | SAMN04488135_10548 | SAMN04488135_101201 | Amino acid adenylation domain-containing protein. | Citrate synthase. | 0.789 |
SHH81414.1 | SHI15065.1 | SAMN04488135_10548 | SAMN04488135_110134 | Amino acid adenylation domain-containing protein. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.404 |
SHH81414.1 | SHI16491.1 | SAMN04488135_10548 | SAMN04488135_11121 | Amino acid adenylation domain-containing protein. | Isocitrate dehydrogenase (NADP). | 0.480 |
SHH81414.1 | SHI26069.1 | SAMN04488135_10548 | SAMN04488135_1171 | Amino acid adenylation domain-containing protein. | Citrate synthase. | 0.789 |
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