STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI27307.1Hypothetical protein. (384 aa)    
Predicted Functional Partners:
SHI27121.1
Protein of unknown function.
  
     0.761
SHI25224.1
Conserved hypothetical protein (putative transposase or invertase).
 
     0.746
SHI27075.1
Protein of unknown function.
  
     0.728
SHI19874.1
Protein of unknown function.
  
     0.727
SHH24982.1
Putative transposase, YhgA-like.
  
     0.719
SHI46436.1
Protein of unknown function.
  
     0.718
SHI27595.1
Protein of unknown function.
  
     0.715
SHI28672.1
Putative transposase, YhgA-like.
  
     0.707
SHI00750.1
Protein of unknown function.
  
     0.689
SHG84769.1
Protein of unknown function.
 
     0.636
Your Current Organism:
Candidimonas bauzanensis
NCBI taxonomy Id: 658167
Other names: Alcaligenaceae bacterium BZ59, C. bauzanensis, CGMCC 1.10190, Candidimonas bauzanensis Zhang et al. 2012, DSM 22805, LMG 26046, LMG:26046, strain BZ59
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.