Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG80319.1 | SHH24571.1 | SAMN04488135_101310 | SAMN04488135_102550 | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | TonB protein C-terminal. | 0.601 |
SHG80319.1 | SHH53818.1 | SAMN04488135_101310 | SAMN04488135_103471 | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | Protein TonB. | 0.601 |
SHG80319.1 | SHH81414.1 | SAMN04488135_101310 | SAMN04488135_10548 | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | Amino acid adenylation domain-containing protein. | 0.927 |
SHG80319.1 | SHI01762.1 | SAMN04488135_101310 | SAMN04488135_10757 | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | Outer membrane transport energization protein TonB (TC 2.C.1.1.1); Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.601 |
SHG80319.1 | SHI25637.1 | SAMN04488135_101310 | SAMN04488135_11668 | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | Pesticin/yersiniabactin receptor. | 0.729 |
SHG80319.1 | SHI41245.1 | SAMN04488135_101310 | SAMN04488135_12351 | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | Outer membrane receptor for ferrienterochelin and colicins. | 0.716 |
SHH24571.1 | SHG80319.1 | SAMN04488135_102550 | SAMN04488135_101310 | TonB protein C-terminal. | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | 0.601 |
SHH24571.1 | SHH81414.1 | SAMN04488135_102550 | SAMN04488135_10548 | TonB protein C-terminal. | Amino acid adenylation domain-containing protein. | 0.436 |
SHH24571.1 | SHH86235.1 | SAMN04488135_102550 | SAMN04488135_105227 | TonB protein C-terminal. | Iron complex outermembrane recepter protein. | 0.705 |
SHH24571.1 | SHI23995.1 | SAMN04488135_102550 | SAMN04488135_11533 | TonB protein C-terminal. | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | 0.601 |
SHH24571.1 | SHI25637.1 | SAMN04488135_102550 | SAMN04488135_11668 | TonB protein C-terminal. | Pesticin/yersiniabactin receptor. | 0.705 |
SHH24571.1 | SHI41245.1 | SAMN04488135_102550 | SAMN04488135_12351 | TonB protein C-terminal. | Outer membrane receptor for ferrienterochelin and colicins. | 0.699 |
SHH53818.1 | SHG80319.1 | SAMN04488135_103471 | SAMN04488135_101310 | Protein TonB. | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | 0.601 |
SHH53818.1 | SHH81414.1 | SAMN04488135_103471 | SAMN04488135_10548 | Protein TonB. | Amino acid adenylation domain-containing protein. | 0.436 |
SHH53818.1 | SHH86235.1 | SAMN04488135_103471 | SAMN04488135_105227 | Protein TonB. | Iron complex outermembrane recepter protein. | 0.705 |
SHH53818.1 | SHI23995.1 | SAMN04488135_103471 | SAMN04488135_11533 | Protein TonB. | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | 0.601 |
SHH53818.1 | SHI25637.1 | SAMN04488135_103471 | SAMN04488135_11668 | Protein TonB. | Pesticin/yersiniabactin receptor. | 0.705 |
SHH53818.1 | SHI41245.1 | SAMN04488135_103471 | SAMN04488135_12351 | Protein TonB. | Outer membrane receptor for ferrienterochelin and colicins. | 0.737 |
SHH81414.1 | SHG80319.1 | SAMN04488135_10548 | SAMN04488135_101310 | Amino acid adenylation domain-containing protein. | Outer-membrane receptor for ferric coprogen and ferric-rhodotorulic acid. | 0.927 |
SHH81414.1 | SHH24571.1 | SAMN04488135_10548 | SAMN04488135_102550 | Amino acid adenylation domain-containing protein. | TonB protein C-terminal. | 0.436 |
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