STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliGCOG1536 Flagellar motor switch protein. (350 aa)    
Predicted Functional Partners:
CKC_00520
COG1868 Flagellar motor switch protein.
 
 0.999
CKC_00525
Putative flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 0.999
CKC_00550
Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.999
fliI
Flagellum-specific ATP synthase; COG1157 Flagellar biosynthesis/type III secretory pathway ATPase.
 
 
 0.995
CKC_00495
COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.993
flgE
COG1749 Flagellar hook protein FlgE.
 
  
 0.989
CKC_00535
COG1377 Flagellar biosynthesis pathway, component FlhB.
 
 
 0.987
CKC_00515
COG1291 Flagellar motor component.
  
  
 0.986
fliE
COG1677 Flagellar hook-basal body protein.
  
 
 0.984
CKC_02150
GTP cyclohydrolase II protein (riboflavin biosynthesis); Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate. Belongs to the DHBP synthase family.
    
 
 0.981
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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