STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKC_00920Hypothetical protein. (172 aa)    
Predicted Functional Partners:
CKC_00915
Hypothetical protein.
 
    0.947
CKC_00940
Head-to-tail joining protein, putative.
 
    0.785
CKC_05780
Head-to-tail joining protein, putative.
 
    0.785
CKC_05755
Hypothetical protein.
 
    0.778
CKC_00925
Hypothetical protein.
       0.776
CKC_00910
Hypothetical protein.
       0.773
CKC_00930
Hypothetical protein.
       0.705
CKC_00895
Hypothetical protein.
       0.661
CKC_00900
Hypothetical protein.
       0.661
CKC_00905
Hypothetical protein.
       0.661
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.