STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKC_01580Hypothetical protein. (171 aa)    
Predicted Functional Partners:
CKC_02830
Hypothetical protein.
  
     0.674
CKC_01585
DSBA oxidoreductase; COG1651 Protein-disulfide isomerase.
 
     0.660
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.634
CKC_00110
Hypothetical protein.
  
     0.564
CKC_00220
COG0625 Glutathione S-transferase.
  
     0.534
CKC_01575
A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.
       0.534
CKC_00055
Hypothetical protein; COG0593 ATPase involved in DNA replication initiation; Belongs to the DnaA family.
  
     0.532
CKC_02340
Putative cell division protein; COG2919 Septum formation initiator.
  
     0.511
CKC_01485
Double-strand break repair protein AddB; COG3893 Inactivated superfamily I helicase.
  
     0.467
CKC_05630
COG4765 Uncharacterized protein conserved in bacteria.
  
     0.454
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.