STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKC_01650COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport. (209 aa)    
Predicted Functional Partners:
CKC_01660
Hypothetical protein; COG0672 High-affinity Fe2+/Pb2+ permease.
 
  
 0.983
CKC_01655
Hypothetical protein.
 
     0.914
CKC_01665
Hypothetical protein; COG2822 Predicted periplasmic lipoprotein involved in iron transport.
  
    0.895
CKC_04795
Lipoprotein-releasing system ATP-binding protein lolD; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
    0.595
CKC_05495
COG0492 Thioredoxin reductase.
   
    0.565
CKC_01670
Dyp-type peroxidase; COG2837 Predicted iron-dependent peroxidase.
 
     0.545
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.