STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKC_02675Putative transcription regulator protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (223 aa)    
Predicted Functional Partners:
CKC_01965
COG5002 Signal transduction histidine kinase.
 
 
 0.994
CKC_04360
Two-component sensor histidine kinase protein; COG0642 Signal transduction histidine kinase.
 
 
 0.994
CKC_01760
Two-component sensor histidine kinase/response regulator hybrid protein; COG0642 Signal transduction histidine kinase.
  
 
 0.992
CKC_02690
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
  
 0.890
CKC_02685
COG1256 Flagellar hook-associated protein.
 
  
 0.885
CKC_02695
Flagellar biosynthesis regulatory protein FlaF.
 
    0.871
CKC_02700
Flagellar biosynthesis repressor FlbT.
 
    0.871
CKC_00580
Putative two-component sensor histidine kinase transcriptional regulatory protein; COG0642 Signal transduction histidine kinase.
 
 
 0.858
CKC_01630
Sensory box/GGDEF family protein; COG2199 FOG: GGDEF domain.
 
 
 0.807
CKC_01495
Two-component sensor histidine kinase protein; COG0642 Signal transduction histidine kinase.
  
 
 0.795
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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