STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKC_03570Diguanylate cyclase; COG2199 FOG: GGDEF domain. (259 aa)    
Predicted Functional Partners:
CKC_01630
Sensory box/GGDEF family protein; COG2199 FOG: GGDEF domain.
 
 
 0.947
CKC_01760
Two-component sensor histidine kinase/response regulator hybrid protein; COG0642 Signal transduction histidine kinase.
 
 
 0.814
CKC_02690
Flagellar hook-associated protein FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
   0.667
CKC_04360
Two-component sensor histidine kinase protein; COG0642 Signal transduction histidine kinase.
 
 
 0.664
CKC_01965
COG5002 Signal transduction histidine kinase.
 
 
 0.662
CKC_00510
COG4786 Flagellar basal body rod protein.
   
   0.644
fliP
Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
  
    0.582
flgI
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
   
    0.524
CKC_02645
Flagellin domain-containing protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
   
   0.507
CKC_02685
COG1256 Flagellar hook-associated protein.
   
    0.487
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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