STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKC_04735Hypothetical protein. (195 aa)    
Predicted Functional Partners:
CKC_00210
TPR repeat-containing protein; COG0457 FOG: TPR repeat.
  
     0.770
CKC_00700
Hypothetical protein.
  
     0.770
CKC_02065
Hypothetical protein.
  
     0.758
CKC_00715
Peptidase A24A prepilin type IV; COG4960 Flp pilus assembly protein, protease CpaA.
  
     0.757
CKC_02940
Hypothetical protein.
  
     0.753
CKC_00080
Hypothetical protein.
  
     0.748
CKC_00695
Response regulator receiver protein; COG0784 FOG: CheY-like receiver.
  
     0.746
CKC_00075
Hypothetical protein.
  
     0.725
CKC_04700
Hypothetical protein.
  
     0.703
CKC_05070
Hypothetical protein; COG0410 ABC-type branched-chain amino acid transport systems, ATPase component.
  
     0.697
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.