STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKC_05850Hypothetical protein. (84 aa)    
Predicted Functional Partners:
CKC_05855
Hypothetical protein.
       0.773
CKC_05860
Hypothetical protein.
       0.773
CKC_05865
Hypothetical protein.
       0.773
CKC_05870
Hypothetical protein.
       0.773
CKC_05875
Hypothetical protein; COG4271 Predicted nucleotide-binding protein containing TIR -like domain.
       0.773
CKC_05845
COG3617 Prophage antirepressor.
       0.714
CKC_05880
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
       0.682
CKC_05885
Hypothetical protein.
       0.484
CKC_05840
Hypothetical protein.
       0.447
Your Current Organism:
Liberibacter solanacearum
NCBI taxonomy Id: 658172
Other names: C. Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum CLso-ZC1, Candidatus Liberibacter solanacearum str. CLso-ZC1, Candidatus Liberibacter solanacearum strain CLso-ZC1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.