Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_5201Hypothetical protein. (288 aa)    
Predicted Functional Partners:
LDG_5202
Hypothetical protein.
 
     0.879
LDG_5196
Hypothetical protein.
 
     0.873
LDG_5187
Hypothetical protein.
 
     0.862
LDG_5195
Hypothetical protein.
 
     0.846
LDG_5185
Hypothetical protein.
 
     0.829
LDG_5194
Hypothetical protein.
 
     0.822
LDG_5186
Hypothetical protein.
 
     0.820
LDG_5180
Hypothetical protein.
 
     0.799
LDG_5200
Hypothetical protein.
       0.782
LDG_6015
Hypothetical protein.
 
     0.778
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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