STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_5228Hypothetical protein; Belongs to the HMG-CoA reductase family. (432 aa)    
Predicted Functional Partners:
LDG_5241
Hypothetical protein.
 
 0.972
LDG_5227
Hypothetical protein.
  
 0.921
fni
Hypothetical protein; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
   
 0.916
LDG_5240
Hypothetical protein.
 
 
 0.910
LDG_8080
Hypothetical protein.
  
 0.903
LDG_5229
Hypothetical protein.
       0.709
LDG_8804
Hypothetical protein.
    
 0.612
LDG_8802
Hypothetical protein.
    
 0.566
LDG_6327
Hypothetical protein.
    
  0.554
LDG_6650
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
 
 0.547
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.