STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_5235ABC transporter, ATP binding protein. (245 aa)    
Predicted Functional Partners:
LDG_5234
Hypothetical protein.
 
 0.999
LDG_5236
ABC transport system periplasmic substrate binding protein.
 
 0.997
LDG_6546
Toluene tolerance protein Ttg2B.
 
 0.996
LDG_6545
Hypothetical protein.
 
 0.990
LDG_6543
Hypothetical protein.
  
 0.980
LDG_5237
Hypothetical protein.
 
 
  0.930
LDG_6544
Hypothetical protein.
  
 
 0.915
LDG_6595
Hypothetical protein.
 
    
0.903
LDG_6547
Hypothetical protein.
     
  0.844
LDG_5410
ABC transporter, permease.
 
      0.830
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.