STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_5475Hypothetical protein; Extracellular zinc metalloprotease. (554 aa)    
Predicted Functional Partners:
LDG_5474
Hypothetical protein.
       0.711
LDG_5476
Hypothetical protein.
       0.592
LDG_5551
Hypothetical protein; Belongs to the glycosyl hydrolase 18 family.
 
   
 0.531
LDG_5255
Hypothetical protein.
  
     0.524
LDG_8750
Hypothetical protein.
 
  
 0.499
LDG_6222
Hypothetical protein.
  
     0.435
LDG_5112
Hypothetical protein.
  
     0.414
LDG_5477
Hypothetical protein.
       0.412
LDG_5473
Hypothetical protein; Belongs to the UPF0307 family.
       0.410
LDG_7410
Hypothetical protein.
  
     0.400
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.