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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_5508Hypothetical protein. (199 aa)    
Predicted Functional Partners:
hisB
Hypothetical protein; In the N-terminal section; belongs to the histidinol- phosphatase family.
  
 
 0.964
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.
    
 
 0.919
LDG_5509
Hypothetical protein.
  
    0.857
LDG_8220
Heptosyl transferase glycosyltransferase family 9 protein.
 
  
 0.808
LDG_8013
Hypothetical protein.
  
 
 0.788
LDG_8768
Hypothetical protein; Belongs to the DnaA family. HdA subfamily.
    
 
 0.750
LDG_5507
Hypothetical protein; Belongs to the UPF0102 family.
  
  
 0.699
LDG_5510
Hypothetical protein.
  
    0.689
nadE
Glutamine dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.660
LDG_8141
Hypothetical protein.
   
 
 0.608
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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