udk protein (Legionella drancourtii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

udk

Uridine kinase. (209 aa)

Predicted Functional Partners:

LDG_7405

0.985

LDG_7978

0.887

pyrH

0.883

cmk

0.875

surE

0.869

pyrF

0.858

LDG_5113

0.844

LDG_7404

0.834

LDG_6047

0.791

LDG_6352

0.754

Your Current Organism:

Legionella drancourtii

NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LDG_5113	LDG_7405	LDG_5113	LDG_7405	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	Uracil phosphoribosyltransferase; Belongs to the UPRTase family.	0.844
LDG_5113	LDG_7978	LDG_5113	LDG_7978	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	Hypothetical protein.	0.745
LDG_5113	cmk	LDG_5113	LDG_6842	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	Cytidylate kinase.	0.882
LDG_5113	pyrF	LDG_5113	LDG_6834	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	Hypothetical protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.	0.844
LDG_5113	pyrH	LDG_5113	LDG_9034	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	0.844
LDG_5113	surE	LDG_5113	LDG_8829	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.	0.844
LDG_5113	udk	LDG_5113	LDG_6351	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	Uridine kinase.	0.844
LDG_6047	pyrH	LDG_6047	LDG_9034	Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	0.493
LDG_6047	udk	LDG_6047	LDG_6351	Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.	Uridine kinase.	0.791
LDG_6352	udk	LDG_6352	LDG_6351	Enoyl reductase.	Uridine kinase.	0.754
LDG_7404	LDG_7405	LDG_7404	LDG_7405	Hypothetical protein.	Uracil phosphoribosyltransferase; Belongs to the UPRTase family.	0.823
LDG_7404	LDG_7978	LDG_7404	LDG_7978	Hypothetical protein.	Hypothetical protein.	0.457
LDG_7404	pyrF	LDG_7404	LDG_6834	Hypothetical protein.	Hypothetical protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.	0.528
LDG_7404	pyrH	LDG_7404	LDG_9034	Hypothetical protein.	Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP.	0.674
LDG_7404	surE	LDG_7404	LDG_8829	Hypothetical protein.	Acid phosphatase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.	0.453
LDG_7404	udk	LDG_7404	LDG_6351	Hypothetical protein.	Uridine kinase.	0.834
LDG_7405	LDG_5113	LDG_7405	LDG_5113	Uracil phosphoribosyltransferase; Belongs to the UPRTase family.	Maf-like protein; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.	0.844
LDG_7405	LDG_7404	LDG_7405	LDG_7404	Uracil phosphoribosyltransferase; Belongs to the UPRTase family.	Hypothetical protein.	0.823
LDG_7405	LDG_7978	LDG_7405	LDG_7978	Uracil phosphoribosyltransferase; Belongs to the UPRTase family.	Hypothetical protein.	0.636
LDG_7405	pyrF	LDG_7405	LDG_6834	Uracil phosphoribosyltransferase; Belongs to the UPRTase family.	Hypothetical protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.	0.911

page 1 of 4

Server load: low (22%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About