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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_6380Nucleoside-diphosphate sugar epimerase. (605 aa)    
Predicted Functional Partners:
LDG_8745
Hypothetical protein; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.960
LDG_8738
DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.958
LDG_6835
Aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.952
LDG_8572
Hypothetical protein.
  
 
 0.951
LDG_6739
Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.924
LDG_5091
Hypothetical protein.
  
 
 0.844
LDG_5317
Hypothetical protein.
  
  
 0.832
LDG_5088
Hypothetical protein.
  
  
 0.823
gmd
Hypothetical protein; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.823
LDG_6301
ATPase (Mrp); Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.819
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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