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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_6455Tfp pilus assembly protein PilO. (198 aa)    
Predicted Functional Partners:
LDG_6454
Hypothetical protein.
 
 
 0.999
LDG_6453
Hypothetical protein.
 
 
 0.995
LDG_6457
Hypothetical protein.
 
 
 0.995
LDG_6459
Hypothetical protein.
 
 
 0.980
LDG_6778
Hypothetical protein.
  
 
   0.966
LDG_6456
Hypothetical protein.
  
 
 0.964
LDG_7420
Hypothetical protein.
  
 
 0.954
LDG_6458
Hypothetical protein.
 
 
 0.931
LDG_7980
Type IV pilus assembly protein PilC.
 
 
 
 0.855
LDG_7378
Hypothetical protein.
 
   
 0.844
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.