Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_6473Hypothetical protein. (216 aa)    
Predicted Functional Partners:
LDG_8804
Hypothetical protein.
  
 0.859
LDG_8802
Hypothetical protein.
   
 0.819
LDG_8013
Hypothetical protein.
  
 0.801
LDG_6474
Hypothetical protein.
  
    0.778
LDG_8545
Hypothetical protein.
   
 0.752
LDG_6472
Hypothetical protein.
       0.751
LDG_8080
Hypothetical protein.
   
 0.746
LDG_5753
Hypothetical protein.
  
  0.726
LDG_6475
Hypothetical protein.
     
 0.715
LDG_6208
Hypothetical protein.
    
   0.714
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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