Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
LDG_6562 | LDG_6563 | Hypothetical protein. | Hypothetical protein. | 0.926 |
LDG_6562 | LDG_6564 | Hypothetical protein. | Hypothetical protein. | 0.871 |
LDG_6562 | LDG_6565 | Hypothetical protein. | Hypothetical protein. | 0.899 |
LDG_6562 | LDG_6566 | Hypothetical protein. | Hypothetical protein. | 0.789 |
LDG_6562 | LDG_6568 | Hypothetical protein. | Hypothetical protein. | 0.839 |
LDG_6562 | LDG_6569 | Hypothetical protein. | Hypothetical protein. | 0.878 |
LDG_6562 | LDG_7079 | Hypothetical protein. | Hypothetical protein. | 0.407 |
LDG_6562 | LDG_7146 | Hypothetical protein. | Hypothetical protein. | 0.456 |
LDG_6562 | LDG_7235 | Hypothetical protein. | Hypothetical protein. | 0.769 |
LDG_6563 | LDG_6562 | Hypothetical protein. | Hypothetical protein. | 0.926 |
LDG_6563 | LDG_6564 | Hypothetical protein. | Hypothetical protein. | 0.904 |
LDG_6563 | LDG_6565 | Hypothetical protein. | Hypothetical protein. | 0.859 |
LDG_6563 | LDG_6566 | Hypothetical protein. | Hypothetical protein. | 0.819 |
LDG_6563 | LDG_6568 | Hypothetical protein. | Hypothetical protein. | 0.891 |
LDG_6563 | LDG_6569 | Hypothetical protein. | Hypothetical protein. | 0.793 |
LDG_6563 | LDG_7079 | Hypothetical protein. | Hypothetical protein. | 0.762 |
LDG_6563 | LDG_7146 | Hypothetical protein. | Hypothetical protein. | 0.779 |
LDG_6563 | LDG_7148 | Hypothetical protein. | Hypothetical protein. | 0.755 |
LDG_6563 | LDG_7235 | Hypothetical protein. | Hypothetical protein. | 0.745 |
LDG_6564 | LDG_6562 | Hypothetical protein. | Hypothetical protein. | 0.871 |
page 1 of 5