STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_6739Hypothetical protein; Belongs to the DegT/DnrJ/EryC1 family. (437 aa)    
Predicted Functional Partners:
LDG_6740
DdhB.
 
 
 0.977
LDG_6741
DdhA.
 
  
 0.956
LDG_6380
Nucleoside-diphosphate sugar epimerase.
 
 
 0.918
LDG_6742
Hypothetical protein.
  
 
 0.887
LDG_6737
Hypothetical protein.
  
 
  0.791
LDG_6738
Hypothetical protein; Belongs to the TPP enzyme family.
 
     0.771
fmt
Methionyl tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
 
 0.693
LDG_7781
Oxidoreductase.
 
 
 0.673
LDG_7099
Hypothetical protein.
  
 
 0.671
LDG_8046
Hypothetical protein.
  
 
 0.671
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.