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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_6917Hypothetical protein. (227 aa)    
Predicted Functional Partners:
LDG_6916
Hypothetical protein.
       0.773
LDG_6505
Hypothetical protein.
    
  0.613
LDG_6506
Hypothetical protein.
    
  0.613
LDG_8804
Hypothetical protein.
  
 
 0.518
LDG_8718
NADPH-dependent FMN reductase family protein.
    
  0.463
LDG_8086
Hypothetical protein.
    
  0.455
LDG_8067
Hypothetical protein.
    
  0.441
LDG_6621
2,4-dienoyl-CoA reductase FadH1.
    
  0.440
LDG_5485
Hypothetical protein.
    
  0.439
LDG_8106
Aminotransferase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
  0.438
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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