Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LDG_6287 | LDG_6920 | LDG_6287 | LDG_6920 | CinA-related competence damage protein; Belongs to the CinA family. | Hypothetical protein. | 0.490 |
LDG_6287 | LDG_8615 | LDG_6287 | LDG_8615 | CinA-related competence damage protein; Belongs to the CinA family. | Hypothetical protein. | 0.977 |
LDG_6287 | nadD | LDG_6287 | LDG_8880 | CinA-related competence damage protein; Belongs to the CinA family. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.809 |
LDG_6918 | LDG_6919 | LDG_6918 | LDG_6919 | Hypothetical protein. | Hypothetical protein. | 0.723 |
LDG_6918 | LDG_6920 | LDG_6918 | LDG_6920 | Hypothetical protein. | Hypothetical protein. | 0.434 |
LDG_6919 | LDG_6918 | LDG_6919 | LDG_6918 | Hypothetical protein. | Hypothetical protein. | 0.723 |
LDG_6919 | LDG_6920 | LDG_6919 | LDG_6920 | Hypothetical protein. | Hypothetical protein. | 0.459 |
LDG_6920 | LDG_6287 | LDG_6920 | LDG_6287 | Hypothetical protein. | CinA-related competence damage protein; Belongs to the CinA family. | 0.490 |
LDG_6920 | LDG_6918 | LDG_6920 | LDG_6918 | Hypothetical protein. | Hypothetical protein. | 0.434 |
LDG_6920 | LDG_6919 | LDG_6920 | LDG_6919 | Hypothetical protein. | Hypothetical protein. | 0.459 |
LDG_6920 | LDG_7939 | LDG_6920 | LDG_7939 | Hypothetical protein. | Hypothetical protein. | 0.440 |
LDG_6920 | LDG_8615 | LDG_6920 | LDG_8615 | Hypothetical protein. | Hypothetical protein. | 0.427 |
LDG_6920 | LDG_8804 | LDG_6920 | LDG_8804 | Hypothetical protein. | Hypothetical protein. | 0.493 |
LDG_6920 | nadD | LDG_6920 | LDG_8880 | Hypothetical protein. | Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD). | 0.457 |
LDG_6920 | pfp | LDG_6920 | LDG_7643 | Hypothetical protein. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. | 0.433 |
LDG_6920 | pyrF | LDG_6920 | LDG_6834 | Hypothetical protein. | Hypothetical protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.436 |
LDG_6920 | tdk | LDG_6920 | LDG_8975 | Hypothetical protein. | Hypothetical protein. | 0.456 |
LDG_7939 | LDG_6920 | LDG_7939 | LDG_6920 | Hypothetical protein. | Hypothetical protein. | 0.440 |
LDG_7939 | LDG_8804 | LDG_7939 | LDG_8804 | Hypothetical protein. | Hypothetical protein. | 0.428 |
LDG_8615 | LDG_6287 | LDG_8615 | LDG_6287 | Hypothetical protein. | CinA-related competence damage protein; Belongs to the CinA family. | 0.977 |
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