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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7019Fatty acid desaturase. (350 aa)    
Predicted Functional Partners:
LDG_7285
Putative oxidoreductase, FAD-binding.
  
 
 0.805
LDG_6742
Hypothetical protein.
  
 
 0.761
LDG_5753
Hypothetical protein.
    
 0.717
LDG_8133
stearoyl-CoA-9-desaturase.
   
 0.710
LDG_6226
Hypothetical protein; Accepts electrons from ETF and reduces ubiquinone.
   
 
 0.687
LDG_6605
Hypothetical protein.
     
 0.662
LDG_5342
Hypothetical protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
 
  
 0.650
dnaK
Chaperone protein DnaK (heat shock 70 kDa protein,HSP70); Acts as a chaperone; Belongs to the heat shock protein 70 family.
     
 0.647
LDG_8558
Phenol hydroxylase.
  
 
 0.640
LDG_5702
Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
    
 0.620
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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