Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7081Hypothetical protein. (191 aa)    
Predicted Functional Partners:
LDG_7082
Hypothetical protein.
 
   
 0.912
LDG_7080
Hypothetical protein.
 
     0.795
LDG_7079
Hypothetical protein.
 
     0.625
LDG_7235
Hypothetical protein.
  
     0.556
LDG_7108
Hypothetical protein.
  
     0.536
LDG_7089
Hypothetical protein.
  
     0.532
LDG_7078
Hypothetical protein.
 
     0.439
LDG_7145
Hypothetical protein.
  
     0.412
LDG_7356
Hypothetical protein.
  
     0.402
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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