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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7084UbiE/COQ5 family methyltransferase. (255 aa)    
Predicted Functional Partners:
LDG_7089
Hypothetical protein.
 
     0.922
LDG_7087
Hypothetical protein.
 
     0.914
LDG_7088
Hypothetical protein.
 
     0.905
LDG_7086
Hypothetical protein.
 
     0.870
LDG_7085
Putative chloramphenicol 3-O phosphotransferase.
 
     0.851
LDG_7145
Hypothetical protein.
  
     0.706
LDG_5214
Hypothetical protein.
  
     0.688
LDG_7090
Hypothetical protein.
 
     0.596
ribBA
Riboflavin biosynthesis protein RibA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.569
LDG_7096
Hypothetical protein.
 
     0.564
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.