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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7101Hypothetical protein. (135 aa)    
Predicted Functional Partners:
LDG_7102
Hypothetical protein.
 
     0.811
LDG_7098
Hypothetical protein.
       0.776
LDG_7100
Hypothetical protein.
       0.776
LDG_7079
Hypothetical protein.
  
     0.774
LDG_7099
Hypothetical protein.
       0.774
LDG_7148
Hypothetical protein.
  
     0.774
LDG_7096
Hypothetical protein.
 
     0.647
LDG_7109
Hypothetical protein.
 
     0.603
LDG_7097
Transcriptional regulator (MarR family).
 
     0.602
LDG_6296
Hypothetical protein.
    
   0.594
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.