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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7529Cytochrome c3 hydrogenase alpha (or beta) chain. (380 aa)    
Predicted Functional Partners:
LDG_7528
Hypothetical protein.
 
 0.997
LDG_7526
Hypothetical protein.
 
  
 0.984
LDG_7527
Hypothetical protein.
 
  
 0.984
LDG_7525
Hypothetical protein.
 
   
 0.964
LDG_7533
Hypothetical protein; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.
 
   
 0.857
LDG_7530
Hypothetical protein.
     
 0.844
LDG_7531
Hypothetical protein; Belongs to the HypD family.
     
 0.831
LDG_7532
Hypothetical protein.
       0.795
LDG_6848
Hypothetical protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
  
 
 0.787
LDG_6505
Hypothetical protein.
  
 
 0.772
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.