STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7541Nitric oxide reductase, subunit B. (774 aa)    
Predicted Functional Partners:
LDG_5397
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.963
LDG_6890
Hypothetical protein.
 
 0.963
LDG_7936
Hypothetical protein.
  
 0.961
LDG_5398
Cytochrome c.
  
 0.891
LDG_7827
Hypothetical protein.
  
  
 0.832
LDG_8229
Ubiquinol cytochrome C oxidoreductase cytochrome C1 subunit.
 
  
 0.630
LDG_7542
Hypothetical protein.
       0.537
LDG_7846
Hypothetical protein.
      
 0.511
LDG_5394
Cytochrome c oxidase, subunit III.
 
  
 0.483
LDG_7540
Magnesium-transporting ATPase, P-type.
       0.479
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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