STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7811RelE toxin. (88 aa)    
Predicted Functional Partners:
LDG_7812
Hypothetical protein.
 
   
 0.953
LDG_7788
Hypothetical protein.
 
 
 0.707
LDG_8273
Hypothetical protein.
 
 
 0.627
LDG_7817
Hypothetical protein.
 
 
   0.571
LDG_8023
Hypothetical protein.
 
 
   0.521
LDG_5523
Hypothetical protein.
 
 
   0.506
LDG_5891
Hypothetical protein.
 
 
   0.494
LDG_5563
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.468
LDG_6481
Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.468
LDG_7813
Hypothetical protein.
       0.435
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.