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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7833Hypothetical protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. (106 aa)    
Predicted Functional Partners:
LDG_7834
Hypothetical protein.
     0.984
LDG_7832
Hypothetical protein.
 
   
 0.961
LDG_7829
Hypothetical protein.
 
   
 0.947
LDG_7831
Gas vesicle protein GVPa.
 
     0.947
LDG_7835
Hypothetical protein; Belongs to the small heat shock protein (HSP20) family.
 
     0.937
LDG_7837
Hypothetical protein.
 
     0.932
LDG_7827
Hypothetical protein.
 
   
 0.918
LDG_7836
Hypothetical protein; Belongs to the AAA ATPase family.
 
     0.915
gvpA
Hypothetical protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.892
LDG_7830
Hypothetical protein.
     
 0.832
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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