STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_7873Hypothetical protein. (213 aa)    
Predicted Functional Partners:
LDG_7872
Hypothetical protein.
       0.791
LDG_5699
Hypothetical protein.
  
 
  0.790
LDG_6220
Hypothetical protein.
  
   0.765
LDG_5235
ABC transporter, ATP binding protein.
 
  
  0.762
ftsE
Hypothetical protein; Part of the ABC transporter FtsEX involved in cellular division.
  
     0.755
LDG_9040
Hypothetical protein.
  
   0.753
LDG_7143
Hypothetical protein.
  
 
  0.717
msbA
Lipid ABC transporter permease/ATP-binding protein; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
  
 
  0.712
LDG_6547
Hypothetical protein.
 
  
  0.656
rpsI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
  
     0.632
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.