STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_8110Hypothetical protein. (153 aa)    
Predicted Functional Partners:
LDG_8105
Hypothetical protein.
 
  
 0.994
LDG_8916
Cysteine desulfurase NifS.
  
 
 0.977
LDG_8107
ABC transporter, permease component.
 
   
 0.896
LDG_8109
Cysteine desulfurase activator complex subunit SufB.
 
   
 0.888
LDG_8108
ATP transporter, ABC binding component, ATP-binding protein.
 
   
 0.886
LDG_8106
Aminotransferase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
     0.857
LDG_8918
Hypothetical protein; Belongs to the HesB/IscA family.
  
  
 0.854
LDG_8104
Hypothetical protein.
     
 0.797
LDG_8103
Lysyl tRNA synthetase.
       0.751
LDG_8901
Hypothetical protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.
    
   0.600
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.