STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LDG_8429ABC transporter, permease protein. (257 aa)    
Predicted Functional Partners:
LDG_8430
Hypothetical protein.
 
 0.986
LDG_5092
Hypothetical protein.
  
 
 0.656
LDG_5117
Hypothetical protein.
  
 
 0.656
LDG_8802
Hypothetical protein.
     
 0.629
LDG_7602
ABC transporter ATP-binding protein.
  
 
 0.610
LDG_8624
Export ABC transporter ATP-binding protein / export ABC transporter permease protein.
  
 
 0.610
LDG_5050
Hypothetical protein.
  
    0.570
LDG_7548
Nitroreductase.
  
    0.570
LDG_8437
Hypothetical protein.
       0.527
LDG_7065
Hypothetical protein.
   
 
  0.474
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.