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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDG_8533Phosphate transport regulator. (217 aa)    
Predicted Functional Partners:
LDG_8532
Phosphate transporter.
 
  
 0.993
LDG_5468
Low affinity inorganic phosphate transporter.
 
  
 0.914
rnpA
Hypothetical protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
    0.626
LDG_8579
50S ribosomal protein L28.
  
    0.601
LDG_8534
Hypothetical protein.
       0.564
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
    0.510
LDG_8535
Transcriptional regulator; Belongs to the UPF0301 (AlgH) family.
       0.468
LDG_8536
YqgF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.
       0.468
pyrB
Hypothetical protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
       0.445
LDG_6093
Hypothetical protein.
   
    0.420
Your Current Organism:
Legionella drancourtii
NCBI taxonomy Id: 658187
Other names: L. drancourtii LLAP12, Legionella drancourtii LLAP12, Legionella drancourtii str. LLAP12, Legionella drancourtii strain LLAP12
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